Difference between revisions of "Software Resources"

From SPNHC Wiki
Jump to: navigation, search
(→‎Software Resources)
Line 8: Line 8:
  
 
The list of resources here includes both open source and proprietary software operating on both free and paid sustainability models. SPNHC does not endorse any of the resources included in the list below, and anyone is welcome to add resources that fall within the scope define in the [[#Statement of Purpose|Statement of Purpose]].
 
The list of resources here includes both open source and proprietary software operating on both free and paid sustainability models. SPNHC does not endorse any of the resources included in the list below, and anyone is welcome to add resources that fall within the scope define in the [[#Statement of Purpose|Statement of Purpose]].
 +
 +
{| class="wikitable" style="margin:auto"
 +
|+ style="text-align:left;" | ''Table listing software resources of interest to the natural history collections community.''
 +
|-
 +
! Name of resource
 +
! Developer
 +
! Category
 +
! Primary link
 +
! Primary point(s) of contact
 +
! Summary
 +
! Additional links
 +
! Links to DemoCamp presentations
 +
|-
 +
| Symbiota
 +
| Arizona State University
 +
| collections management system
 +
|
 +
|
 +
| Symbiota is an open-source software for managing and mobilizing biodiversity data that supports a distributed network of 40+ theme-based research portals incorporating data from over 1,400 biodiversity collections. The Symbiota Support Hub (SSH) provides comprehensive services for active and developing biodiversity data portals powered by the Symbiota software platform.
 +
|
 +
|
 +
|-
 +
| TaxonWorks
 +
| SpeciesFile Group
 +
| collections management system
 +
|
 +
|
 +
| TaxonWorks (TW) is a web-based platform, a workbench, serving taxonomists, biodiversity scientists, natural history collections and more. It allows you to capture, organize, and enrich your taxonomic, nomenclature, collections, and bibliographic source data; share it with collaborators; and package it for analysis and publication. The software has been in production for over 5 years and is very actively updated by a core team of 5 with numerous other community and internal contributions. Anyone in the world can and is encouraged to contribute to the open-source code base, https://github.com/SpeciesFileGroup/taxonworks. Talk with us and the TW community on gitter (https://gitter.im/SpeciesFileGroup/taxonworks).
 +
|
 +
|
 +
|-
 +
| Arctos
 +
| Arctos Consortium
 +
| collections management system
 +
|
 +
|
 +
| Arctos is a community of museums and organizations that collaborate in the development of an online collection management information system that we consider to be fundamental research infrastructure intended for curators, collection managers, investigators, educators, and anyone interested in natural and cultural history.
 +
|
 +
|
 +
|-
 +
| DiSSCo Knowledgebase
 +
| DiSSCo
 +
| knowledge base
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|-
 +
| Global Names Architecture
 +
| SpeciesFile Group
 +
| data cleaning tool
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|-
 +
| GEOLocate
 +
| Yale Peabody Museum of Natural History
 +
| geospatial tool
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|-
 +
| TORCH Digitization Hub
 +
| Botanical Research Institute of Texas
 +
| knowledge base
 +
| https://github.com/TORCH-TCN/torch_hub
 +
| Jason Best (jbest@brit.org), Diego Barroso (dbarroso@brit.org)
 +
|
 +
|
 +
|
 +
|-
 +
| Conserv Cloud
 +
|
 +
| collections operations tool
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|-
 +
| ELViS
 +
|
 +
| collections operations tool
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|-
 +
| PyrΔTE
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|-
 +
| Libnova Open Access
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|-
 +
| EarthCape
 +
|
 +
| collections management system
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|-
 +
| IrisBG
 +
|
 +
| collections management system
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|-
 +
| Bionomia
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|-
 +
| OpenRefine
 +
| OpenRefine
 +
| data cleaning tool
 +
|
 +
|
 +
|
 +
|
 +
|
 +
|-
 +
|}
  
 
==Contributors==
 
==Contributors==

Revision as of 15:15, 2 May 2023

Statement of Purpose

This page is a finding aid for users to discover information about software resources relevant to the SPNHC community. This includes but is not limited to collections/content management systems, specimen digitization tools, and tools designed to facilitate specimen-based research. Many of the resources below have been presented in SPNHC DemoCamp, a venue at the Society's annual meeting for software developers, biodiversity informaticians, digitization professionals, and collection managers to convene and share innovative approaches for the use of technology to enhance the management and use of natural history collections. See also the wiki page on Digitization for related information.

This page is not a primary repository of information about any of the resources included in the list below. This means that no files (media or otherwise) should be uploaded to this wiki in support of the text. If in doubt, link out!

Software Resources

The list of resources here includes both open source and proprietary software operating on both free and paid sustainability models. SPNHC does not endorse any of the resources included in the list below, and anyone is welcome to add resources that fall within the scope define in the Statement of Purpose.

Table listing software resources of interest to the natural history collections community.
Name of resource Developer Category Primary link Primary point(s) of contact Summary Additional links Links to DemoCamp presentations
Symbiota Arizona State University collections management system Symbiota is an open-source software for managing and mobilizing biodiversity data that supports a distributed network of 40+ theme-based research portals incorporating data from over 1,400 biodiversity collections. The Symbiota Support Hub (SSH) provides comprehensive services for active and developing biodiversity data portals powered by the Symbiota software platform.
TaxonWorks SpeciesFile Group collections management system TaxonWorks (TW) is a web-based platform, a workbench, serving taxonomists, biodiversity scientists, natural history collections and more. It allows you to capture, organize, and enrich your taxonomic, nomenclature, collections, and bibliographic source data; share it with collaborators; and package it for analysis and publication. The software has been in production for over 5 years and is very actively updated by a core team of 5 with numerous other community and internal contributions. Anyone in the world can and is encouraged to contribute to the open-source code base, https://github.com/SpeciesFileGroup/taxonworks. Talk with us and the TW community on gitter (https://gitter.im/SpeciesFileGroup/taxonworks).
Arctos Arctos Consortium collections management system Arctos is a community of museums and organizations that collaborate in the development of an online collection management information system that we consider to be fundamental research infrastructure intended for curators, collection managers, investigators, educators, and anyone interested in natural and cultural history.
DiSSCo Knowledgebase DiSSCo knowledge base
Global Names Architecture SpeciesFile Group data cleaning tool
GEOLocate Yale Peabody Museum of Natural History geospatial tool
TORCH Digitization Hub Botanical Research Institute of Texas knowledge base https://github.com/TORCH-TCN/torch_hub Jason Best (jbest@brit.org), Diego Barroso (dbarroso@brit.org)
Conserv Cloud collections operations tool
ELViS collections operations tool
PyrΔTE
Libnova Open Access
EarthCape collections management system
IrisBG collections management system
Bionomia
OpenRefine OpenRefine data cleaning tool

Contributors

Anyone is welcome to contribute to this page! If you do, please add yourself to this list of existing contributors: Erica Krimmel, Jason Best, Cat Chapman.

References

Retrieved from "https://spnhc.biowikifarm.net/w/index.php?title=Software_Resources&oldid=4496"